Protein2GeneTree

Maintenance

Please be aware that routine server maintenance is being performed and Protein2GeneTree will be accessible as soon as possible. — Maintenance! check the github repository

Protein2GeneTree

Protein2GeneTree is a gene tree correction method that takes as input a protein tree and a species tree, and build an optimal gene tree minimizing the double reconciliation cost with the protein tree and the species tree.

If you are using our tool, please cite our paper

Kuitche, E., Lafond, M., & Ouangraoua, A. (2017). Reconstructing protein and gene phylogenies using reconciliation and soft-clustering. Journal of bioinformatics and computational biology, 15(06), 1740007.